STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00691.1Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. (479 aa)    
Predicted Functional Partners:
AKJ03350.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
     0.726
AKJ06144.1
Glycoside hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.705
AKJ04818.1
Alpha-L-arabinofuranosidase II precursor.
   
0.647
AKJ01658.1
Putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 30 family.
 
  
 0.588
AKJ03179.1
Beta-mannosidase; Belongs to the glycosyl hydrolase 2 family.
 
     0.551
AKJ00690.1
Hypothetical protein.
       0.511
AKI98662.1
Hypothetical protein.
  
     0.502
AKJ07724.1
Beta-mannosidase.
 
     0.495
AKJ07094.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
   
 0.490
AKJ00831.1
Chitinase.
  
   
 0.480
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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