STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00708.1Extracellular endoglucanase precursor. (302 aa)    
Predicted Functional Partners:
AKJ01357.1
Hypothetical protein.
  
     0.581
AKI99023.1
Endoglucanase E precursor.
  
     0.555
AKJ08071.1
Secreted hydrolase.
  
   
 0.528
AKJ00561.1
Endoglucanase; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
 
   
 0.517
AKJ06226.1
Endo-1,4-beta-xylanase A precursor.
  
   
 0.502
AKJ00498.1
Glycosyltransferase.
  
     0.483
AKJ00707.1
Hypothetical protein.
       0.477
AKJ07144.1
GTP cyclohydrolase II.
  
     0.455
AKI98771.1
Prenyltransferase.
  
     0.450
AKJ07649.1
Hypothetical protein.
  
     0.440
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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