Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00739.1Hypothetical protein. (162 aa)    
Predicted Functional Partners:
prmA
Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
       0.671
AKJ07698.1
Hypothetical protein.
  
     0.575
AKJ05323.1
Polyhydroxyalkanoic acid synthase.
  
     0.524
AKJ00745.1
Type IV fimbrial biogenesis protein PilY1.
 
     0.503
AKJ08229.1
Hypothetical protein.
  
     0.500
AKJ07096.1
Hypothetical protein.
  
     0.491
AKJ02040.1
Putative lipoprotein.
  
     0.450
AKI99579.1
Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
   
    0.447
AKJ04209.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.419
AKJ01715.1
Type IV fimbrial biogenesis protein PilY1.
  
     0.418
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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