Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKJ00748.1Plectin 1 isoform 8. (529 aa)    
Predicted Functional Partners:
AKJ00750.1
Hypothetical protein; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
    0.840
AKJ02161.1
Plectin 1 isoform 8.
  
   0.780
AKJ01255.1
TolA protein.
 
   0.771
AKJ04380.1
Hypothetical protein.
  
     0.749
AKJ07382.1
Exonuclease SbcC.
  
     0.728
AKJ06614.1
Hypothetical protein.
  
     0.725
AKJ00466.1
RTX toxin.
  
     0.724
AKJ01243.1
Hypothetical protein.
  
     0.720
AKJ02914.1
Hypothetical protein.
  
     0.715
AKJ05146.1
DNA gyrase subunit B.
  
     0.707
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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