STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00754.1Internalin, putative. (2526 aa)    
Predicted Functional Partners:
AKI99735.1
Inner spore coat protein H.
  
     0.718
AKJ07333.1
Trypsin domain protein; Belongs to the peptidase S1B family.
  
     0.689
AKI99115.1
Hypothetical protein.
 
     0.682
AKI99350.1
Phosphoesterase protein.
  
     0.675
AKJ04524.1
Hypothetical protein.
 
 
 0.673
AKJ06332.1
TonB family protein.
 
 
 
 0.659
AKJ05673.1
Putative lipoprotein.
 
 
 0.629
AKJ03190.1
DNA gyrase subunit A.
  
     0.614
AKJ01264.1
Hypothetical protein.
  
     0.611
AKJ02790.1
TonB-dependent receptor.
  
 
 
 0.601
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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