STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00762.1Branched-chain amino acid ABC transporter, amino acid-binding protein. (399 aa)    
Predicted Functional Partners:
AKJ07760.1
Branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.994
AKJ07761.1
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
 0.991
AKJ07759.1
Branched-chain amino acid transport ATP-binding protein LivG.
 
 
 0.989
AKJ07758.1
Branched-chain amino acid transport ATP-binding protein LivF.
 
 
 0.988
AKJ01138.1
Branched-chain amino acid ABC transporter, amino acid-binding protein.
  
 
0.934
AKJ00909.1
Branched-chain amino acid ABC transporter, amino acid-binding protein.
  
  
  0.916
AKJ02329.1
Branched-chain amino acid ABC transporter, amino acid-binding protein.
  
  
 
0.902
AKJ07762.1
Branched-chain amino acid ABC transporter, amino acid-binding protein.
  
  
 
0.901
AKJ00761.1
Universal stress protein UspA.
       0.480
rpmE
LSU ribosomal protein L31p; Binds the 23S rRNA.
  
    0.461
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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