STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00769.1Iron-sulfur cluster assembly protein SufD. (441 aa)    
Predicted Functional Partners:
AKJ00767.1
Iron-sulfur cluster assembly protein SufB.
 
0.999
AKJ00768.1
Iron-sulfur cluster assembly ATPase protein SufC.
 
 0.999
AKJ00770.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.992
AKJ00771.1
Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2.
 
  
 0.981
AKJ04786.1
Cysteine desulfurase.
 
 0.949
AKJ00772.1
Probably aromatic ring hydroxylating enzyme.
 
   
 0.943
AKJ00766.1
Iron-sulfur cluster regulator IscR.
 
   
 0.876
AKI99755.1
Cysteine desulfurase.
 
 0.862
AKJ05954.1
Cysteine desulfurase.
 
 
 0.761
AKJ02199.1
Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
  
  
 0.753
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.