Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00773.1Putative lipoprotein. (136 aa)    
Predicted Functional Partners:
AKJ02424.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.597
AKJ02806.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.597
AKJ02809.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.597
AKJ03529.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.580
AKJ00054.1
Long-chain-fatty-acid--CoA ligase.
   
 
 0.557
AKJ03360.1
Malonyl CoA-acyl carrier protein transacylase.
   
 
 0.557
AKJ04231.1
Non-ribosomal peptide synthase.
   
 
 0.557
ybeY
Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
 
 0.537
rplQ
LSU ribosomal protein L17p.
  
   0.515
rpsQ
SSU ribosomal protein S17p; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
   0.512
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.