STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00776.1Fibronectin type III domain protein. (615 aa)    
Predicted Functional Partners:
AKJ00561.1
Endoglucanase; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
  
     0.572
AKI99191.1
Putative secreted glycosyl hydrolase; Belongs to the peptidase S1B family.
  
     0.570
AKJ08214.1
Pentalenene synthase.
  
     0.538
AKJ01657.1
Streptogrisin-C precursor.
  
     0.537
AKJ08069.1
Pentalenene synthase.
  
     0.528
AKJ00775.1
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.461
AKJ07685.1
Metalloprotease MEP1-like protein.
  
     0.461
AKJ07686.1
Metalloprotease MEP1-like protein.
  
     0.461
AKJ07684.1
Metalloprotease MEP1-like protein.
  
     0.459
AKJ08412.1
Vibriolysin, extracellular zinc protease.
  
     0.458
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.