Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AKJ00785.1Transcriptional regulator, TetR family. (218 aa)    
Predicted Functional Partners:
AKJ00786.1
Cell division protein FtsX.
       0.773
AKJ00787.1
ABC transporter, permease protein.
       0.773
AKJ00788.1
Outer membrane lipoprotein-sorting protein.
       0.645
AKJ00784.1
Putative poly(beta-D-mannuronate) O-acetylase; Belongs to the membrane-bound acyltransferase family.
       0.527
AKJ00789.1
Hypothetical protein.
       0.443
AKJ00790.1
ABC transporter, ATP-binding protein.
   
   0.443
pth
Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.440
AKJ01640.1
Transcriptional regulator, TetR family.
  
     0.413
AKJ00235.1
Transcriptional regulator, TetR family.
  
     0.401
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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