STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00787.1ABC transporter, permease protein. (421 aa)    
Predicted Functional Partners:
AKJ00790.1
ABC transporter, ATP-binding protein.
 
 
 0.936
AKJ00788.1
Outer membrane lipoprotein-sorting protein.
 
 
 
 0.919
AKJ04514.1
Cell division transporter, ATP-binding protein FtsE.
 
 
 0.889
AKJ05838.1
ABC transporter, ATP-binding protein.
 
 
 0.889
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.888
AKJ02447.1
ABC transporter, ATP-binding protein.
 
 
 0.877
AKJ05170.1
ABC transporter, ATP-binding protein.
 
 
 0.876
AKJ06450.1
Lipoprotein releasing system ATP-binding protein LolD.
 
 
 0.858
AKJ06543.1
ABC transporter, ATP-binding protein.
 
 
 0.854
AKJ05168.1
ABC transporter, ATP-binding protein.
 
 
 0.853
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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