STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00790.1ABC transporter, ATP-binding protein. (242 aa)    
Predicted Functional Partners:
AKJ04512.1
Cell division protein FtsX.
 
 0.986
AKJ04513.1
Cell division protein FtsX.
 
 0.986
AKJ07314.1
Macrolide export ATP-binding/permease protein MacB.
 
 0.985
AKJ00786.1
Cell division protein FtsX.
 
 
 0.937
AKJ00787.1
ABC transporter, permease protein.
 
 
 0.936
AKJ05840.1
Hypothetical protein.
 
 
 0.879
AKJ01541.1
Hypothetical protein.
 
 
 0.847
AKJ00789.1
Hypothetical protein.
       0.751
AKJ07898.1
ABC transporter, permease protein.
 
 
 0.729
AKJ05169.1
Permease.
 
 
 0.725
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.