Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00793.1Phytochrome, two-component sensor histidine kinase. (464 aa)    
Predicted Functional Partners:
AKJ06433.1
DNA-binding response regulator.
  
   0.808
AKJ05090.1
Response regulator.
  
   0.802
AKJ02691.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
   0.788
AKJ00794.1
Response regulator of zinc sigma-54-dependent two-component system.
  
   0.787
AKJ02855.1
Adenylate cyclase.
  
 
   0.777
AKJ08451.1
DNA-binding response regulator KdpE.
  
   0.777
AKJ02562.1
Chemotaxis regulator.
  
   0.776
AKJ00792.1
Hypothetical protein.
       0.773
AKI99816.1
Two-component response regulator.
  
 
   0.771
AKJ08133.1
Putative two-component system response regulator.
  
 
   0.771
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.