Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI99816.1 | AKJ00793.1 | AA314_01443 | AA314_02419 | Two-component response regulator. | Phytochrome, two-component sensor histidine kinase. | 0.791 |
AKI99816.1 | AKJ04847.1 | AA314_01443 | AA314_06473 | Two-component response regulator. | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | 0.767 |
AKJ00793.1 | AKI99816.1 | AA314_02419 | AA314_01443 | Phytochrome, two-component sensor histidine kinase. | Two-component response regulator. | 0.791 |
AKJ00793.1 | AKJ00794.1 | AA314_02419 | AA314_02420 | Phytochrome, two-component sensor histidine kinase. | Response regulator of zinc sigma-54-dependent two-component system. | 0.789 |
AKJ00793.1 | AKJ02562.1 | AA314_02419 | AA314_04188 | Phytochrome, two-component sensor histidine kinase. | Chemotaxis regulator. | 0.796 |
AKJ00793.1 | AKJ02691.1 | AA314_02419 | AA314_04317 | Phytochrome, two-component sensor histidine kinase. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.807 |
AKJ00793.1 | AKJ04847.1 | AA314_02419 | AA314_06473 | Phytochrome, two-component sensor histidine kinase. | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | 0.788 |
AKJ00793.1 | AKJ05090.1 | AA314_02419 | AA314_06716 | Phytochrome, two-component sensor histidine kinase. | Response regulator. | 0.820 |
AKJ00793.1 | AKJ06433.1 | AA314_02419 | AA314_08059 | Phytochrome, two-component sensor histidine kinase. | DNA-binding response regulator. | 0.825 |
AKJ00793.1 | AKJ08133.1 | AA314_02419 | AA314_09759 | Phytochrome, two-component sensor histidine kinase. | Putative two-component system response regulator. | 0.790 |
AKJ00793.1 | AKJ08317.1 | AA314_02419 | AA314_09943 | Phytochrome, two-component sensor histidine kinase. | Response regulator. | 0.788 |
AKJ00793.1 | AKJ08451.1 | AA314_02419 | AA314_10077 | Phytochrome, two-component sensor histidine kinase. | DNA-binding response regulator KdpE. | 0.797 |
AKJ00794.1 | AKJ00793.1 | AA314_02420 | AA314_02419 | Response regulator of zinc sigma-54-dependent two-component system. | Phytochrome, two-component sensor histidine kinase. | 0.789 |
AKJ02562.1 | AKJ00793.1 | AA314_04188 | AA314_02419 | Chemotaxis regulator. | Phytochrome, two-component sensor histidine kinase. | 0.796 |
AKJ02562.1 | AKJ04847.1 | AA314_04188 | AA314_06473 | Chemotaxis regulator. | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | 0.719 |
AKJ02691.1 | AKJ00793.1 | AA314_04317 | AA314_02419 | Serine phosphatase RsbU, regulator of sigma subunit. | Phytochrome, two-component sensor histidine kinase. | 0.807 |
AKJ04847.1 | AKI99816.1 | AA314_06473 | AA314_01443 | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | Two-component response regulator. | 0.767 |
AKJ04847.1 | AKJ00793.1 | AA314_06473 | AA314_02419 | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | Phytochrome, two-component sensor histidine kinase. | 0.788 |
AKJ04847.1 | AKJ02562.1 | AA314_06473 | AA314_04188 | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | Chemotaxis regulator. | 0.719 |
AKJ05090.1 | AKJ00793.1 | AA314_06716 | AA314_02419 | Response regulator. | Phytochrome, two-component sensor histidine kinase. | 0.820 |
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