STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00795.1Response regulator of zinc sigma-54-dependent two-component system. (132 aa)    
Predicted Functional Partners:
AKJ05823.1
Flagellar motor switch protein FliM.
  
  
 0.723
AKJ06661.1
Type IV fimbriae expression regulatory protein PilR.
  
     0.577
AKJ02635.1
Response regulator of zinc sigma-54-dependent two-component system.
  
     0.561
AKJ00636.1
Response regulator of zinc sigma-54-dependent two-component system.
  
     0.558
AKI99786.1
Chemotaxis protein methyltransferase CheR.
  
 
 0.523
AKJ02000.1
Nitrogen regulation protein NtrX.
  
     0.517
AKJ04702.1
Hypothetical protein.
  
     0.515
AKJ02057.1
Response regulator of zinc sigma-54-dependent two-component system.
  
     0.513
AKJ03138.1
Sigma-54 dependent transcriptional regulator.
  
     0.507
AKJ00851.1
Response regulator of zinc sigma-54-dependent two-component system.
  
     0.503
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.