STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00800.1Hypothetical protein. (340 aa)    
Predicted Functional Partners:
AKJ03620.1
Hypothetical protein.
  
     0.774
AKI99431.1
Acetylornithine deacetylase.
  
     0.721
AKJ02040.1
Putative lipoprotein.
  
     0.712
AKJ05395.1
Nickel transporter UreH.
  
     0.712
AKJ00206.1
Endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.710
AKJ00330.1
Hypothetical protein.
  
    0.692
AKJ07934.1
Hypothetical protein.
  
     0.668
AKI99035.1
Hypothetical protein.
  
     0.658
AKJ01243.1
Hypothetical protein.
  
     0.653
AKJ06581.1
Metal-dependent hydrolase.
  
     0.640
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.