STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00801.1Hypothetical protein. (633 aa)    
Predicted Functional Partners:
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
 
     0.934
AKJ00805.1
Hypothetical protein.
 
     0.934
AKJ00803.1
Hypothetical protein.
       0.801
AKJ00802.1
Hypothetical protein.
       0.773
AKJ06346.1
Putative virion core protein.
 
  
 0.754
AKJ07752.1
Hypothetical protein.
  
     0.529
AKI98425.1
Hypothetical protein.
  
  
 0.515
AKJ04343.1
Beta-propeller domains of methanol dehydrogenase type.
  
  
 0.515
AKJ04775.1
Beta-propeller domains of methanol dehydrogenase type.
  
  
 0.515
AKJ04490.1
Hypothetical protein.
  
     0.508
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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