STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00812.1Hypothetical protein. (96 aa)    
Predicted Functional Partners:
AKI99455.1
ATP-dependent DNA ligase.
  
     0.718
AKI99097.1
Hypothetical protein.
  
     0.703
AKI99456.1
ATP-dependent DNA ligase.
  
     0.671
AKJ00811.1
Putative glutathione s-transferase protein.
       0.586
AKJ02357.1
Transcriptional regulator, TetR family.
  
     0.555
AKJ00813.1
Putative LIPOPROTEIN transmembrane.
       0.503
AKJ04802.1
Transcriptional regulator, TetR family.
  
     0.485
AKJ06623.1
Phosphoribosylglycinamide formyltransferase.
  
     0.441
AKJ06441.1
Hypothetical protein.
  
     0.431
AKJ05479.1
Transport protein.
  
     0.425
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.