STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00821.1Ferredoxin reductase. (414 aa)    
Predicted Functional Partners:
AKJ00822.1
Ferredoxin, 2Fe-2S.
 
 
 0.992
AKJ05257.1
Iron-sulfur cluster-binding protein, Rieske family.
  
 0.984
AKJ08484.1
Periplasmic nitrate reductase precursor.
   
 0.931
AKJ08485.1
Periplasmic nitrate reductase precursor.
   
 0.927
AKI98382.1
Periplasmic nitrate reductase precursor.
   
 0.924
AKJ02195.1
Ferredoxin, 2Fe-2S.
  
 
 0.918
napA
Periplasmic nitrate reductase precursor; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
    
 0.839
AKI99388.1
Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB.
  
 0.721
AKJ00820.1
Transcriptional regulator, TetR family.
 
    0.721
AKJ00819.1
Hypothetical protein.
     
 0.687
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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