STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00831.1Chitinase. (489 aa)    
Predicted Functional Partners:
AKJ03600.1
Endo-1,4-beta-xylanase A precursor.
  
  
 0.955
AKI98387.1
Beta-hexosaminidase.
     
 0.906
AKJ00615.1
Beta-hexosaminidase.
     
 0.906
AKJ07666.1
Beta-hexosaminidase.
     
 0.906
AKJ08492.1
Beta-hexosaminidase.
     
 0.906
AKI99712.1
Chitinase.
     
  0.900
AKJ04550.1
Rhs-family protein.
  
 
 0.743
AKJ06639.1
Heterocyst differentiation protein.
  
     0.742
AKJ02097.1
High-affnity carbon uptake protein Hat/HatR.
  
     0.740
AKJ05293.1
Hypothetical protein.
  
     0.740
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.