STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00846.1cAMP-binding protein. (201 aa)    
Predicted Functional Partners:
AKJ00847.1
Hypothetical protein.
       0.605
AKJ03778.1
Hypothetical protein.
  
     0.563
AKJ07441.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.559
AKI99740.1
Hypothetical protein.
  
 
   0.548
AKJ07049.1
Hypothetical protein.
  
     0.544
AKI99770.1
Hypothetical protein.
  
     0.521
AKJ00848.1
Hypothetical protein.
       0.500
AKJ05389.1
Chitinase.
  
    0.490
AKJ06280.1
Signal recognition particle receptor protein FtsY.
  
 
   0.490
AKJ02192.1
Hypothetical protein.
  
     0.489
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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