Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ00009.1 | AKJ00848.1 | AA314_01635 | AA314_02474 | Hypothetical protein. | Hypothetical protein. | 0.525 |
AKJ00009.1 | bamD | AA314_01635 | AA314_03352 | Hypothetical protein. | Competence protein ComL precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.933 |
AKJ00846.1 | AKJ00847.1 | AA314_02472 | AA314_02473 | cAMP-binding protein. | Hypothetical protein. | 0.605 |
AKJ00846.1 | AKJ00848.1 | AA314_02472 | AA314_02474 | cAMP-binding protein. | Hypothetical protein. | 0.500 |
AKJ00846.1 | AKJ00849.1 | AA314_02472 | AA314_02475 | cAMP-binding protein. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.457 |
AKJ00847.1 | AKJ00846.1 | AA314_02473 | AA314_02472 | Hypothetical protein. | cAMP-binding protein. | 0.605 |
AKJ00847.1 | AKJ00848.1 | AA314_02473 | AA314_02474 | Hypothetical protein. | Hypothetical protein. | 0.631 |
AKJ00847.1 | AKJ00849.1 | AA314_02473 | AA314_02475 | Hypothetical protein. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.420 |
AKJ00848.1 | AKJ00009.1 | AA314_02474 | AA314_01635 | Hypothetical protein. | Hypothetical protein. | 0.525 |
AKJ00848.1 | AKJ00846.1 | AA314_02474 | AA314_02472 | Hypothetical protein. | cAMP-binding protein. | 0.500 |
AKJ00848.1 | AKJ00847.1 | AA314_02474 | AA314_02473 | Hypothetical protein. | Hypothetical protein. | 0.631 |
AKJ00848.1 | AKJ00849.1 | AA314_02474 | AA314_02475 | Hypothetical protein. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.503 |
AKJ00848.1 | AKJ02583.1 | AA314_02474 | AA314_04209 | Hypothetical protein. | Outer membrane protein H precursor. | 0.534 |
AKJ00848.1 | AKJ05597.1 | AA314_02474 | AA314_07223 | Hypothetical protein. | Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage. | 0.505 |
AKJ00848.1 | AKJ05613.1 | AA314_02474 | AA314_07239 | Hypothetical protein. | Membrane-associated zinc metalloprotease. | 0.505 |
AKJ00848.1 | AKJ07816.1 | AA314_02474 | AA314_09442 | Hypothetical protein. | Hypothetical protein. | 0.505 |
AKJ00848.1 | bamD | AA314_02474 | AA314_03352 | Hypothetical protein. | Competence protein ComL precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.544 |
AKJ00848.1 | tsf | AA314_02474 | AA314_03527 | Hypothetical protein. | Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.526 |
AKJ00849.1 | AKJ00846.1 | AA314_02475 | AA314_02472 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | cAMP-binding protein. | 0.457 |
AKJ00849.1 | AKJ00847.1 | AA314_02475 | AA314_02473 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.420 |
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