Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00856.1Nitrogen regulation protein ntrY. (400 aa)    
Predicted Functional Partners:
AKJ00851.1
Response regulator of zinc sigma-54-dependent two-component system.
 
 
 0.939
AKJ00919.1
Sensory box histidine kinase.
  
 
   0.762
AKJ06433.1
DNA-binding response regulator.
  
 
   0.750
AKJ05090.1
Response regulator.
  
 
   0.747
AKJ02691.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
 
   0.735
AKI99787.1
Putative two-component system response regulator.
  
 
   0.727
AKJ08317.1
Response regulator.
  
 
   0.720
AKJ05453.1
CoB--CoM heterodisulfide reductase subunit A.
  
 
   0.718
AKJ08149.1
Sensor histidine kinase.
  
 
   0.714
AKI98886.1
Sensory box histidine kinase/response regulator.
  
 
   0.709
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.