STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00865.1Competence protein F like protein. (231 aa)    
Predicted Functional Partners:
AKJ05040.1
DNA topoisomerase I.
 
 
 0.918
AKJ05518.1
DNA internalization-related competence protein ComEC/Rec2.
 
  
 0.895
AKJ01619.1
DNA repair protein RadC; Belongs to the UPF0758 family.
 
    0.819
AKJ03428.1
Endonuclease; Belongs to the UPF0102 family.
 
    0.783
AKJ06561.1
Hypothetical protein.
 
  
 0.735
AKJ05823.1
Flagellar motor switch protein FliM.
  
    0.714
AKJ06828.1
N-acetylglucosamine-6-phosphate deacetylase.
  
    0.714
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.710
AKJ02718.1
Teichoic acid export ATP-binding protein TagH.
   
    0.685
AKJ00157.1
Prephenate/arogenate dehydrogenase.
  
  
 0.681
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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