Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI98466.1 | AKJ00215.1 | AA314_00093 | AA314_01841 | Hypothetical protein; Belongs to the UPF0337 (CsbD) family. | Non-specific DNA-binding protein Dps; Belongs to the Dps family. | 0.488 |
AKI98466.1 | AKJ00892.1 | AA314_00093 | AA314_02518 | Hypothetical protein; Belongs to the UPF0337 (CsbD) family. | Putative membrane protein. | 0.501 |
AKI98466.1 | AKJ03488.1 | AA314_00093 | AA314_05114 | Hypothetical protein; Belongs to the UPF0337 (CsbD) family. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.582 |
AKI98782.1 | AKJ00892.1 | AA314_00409 | AA314_02518 | Dimethylhistidine N-methyltransferase. | Putative membrane protein. | 0.523 |
AKJ00215.1 | AKI98466.1 | AA314_01841 | AA314_00093 | Non-specific DNA-binding protein Dps; Belongs to the Dps family. | Hypothetical protein; Belongs to the UPF0337 (CsbD) family. | 0.488 |
AKJ00215.1 | AKJ00892.1 | AA314_01841 | AA314_02518 | Non-specific DNA-binding protein Dps; Belongs to the Dps family. | Putative membrane protein. | 0.425 |
AKJ00215.1 | AKJ03488.1 | AA314_01841 | AA314_05114 | Non-specific DNA-binding protein Dps; Belongs to the Dps family. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.600 |
AKJ00892.1 | AKI98466.1 | AA314_02518 | AA314_00093 | Putative membrane protein. | Hypothetical protein; Belongs to the UPF0337 (CsbD) family. | 0.501 |
AKJ00892.1 | AKI98782.1 | AA314_02518 | AA314_00409 | Putative membrane protein. | Dimethylhistidine N-methyltransferase. | 0.523 |
AKJ00892.1 | AKJ00215.1 | AA314_02518 | AA314_01841 | Putative membrane protein. | Non-specific DNA-binding protein Dps; Belongs to the Dps family. | 0.425 |
AKJ00892.1 | AKJ00932.1 | AA314_02518 | AA314_02558 | Putative membrane protein. | Cys-tRNA(Pro) deacylase YbaK. | 0.412 |
AKJ00892.1 | AKJ03006.1 | AA314_02518 | AA314_04632 | Putative membrane protein. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.415 |
AKJ00892.1 | AKJ03488.1 | AA314_02518 | AA314_05114 | Putative membrane protein. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.485 |
AKJ00892.1 | AKJ06500.1 | AA314_02518 | AA314_08126 | Putative membrane protein. | Two component transcriptional regulator, LytTR family. | 0.412 |
AKJ00892.1 | bioB | AA314_02518 | AA314_02519 | Putative membrane protein. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.561 |
AKJ00892.1 | radA | AA314_02518 | AA314_02517 | Putative membrane protein. | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.486 |
AKJ00932.1 | AKJ00892.1 | AA314_02558 | AA314_02518 | Cys-tRNA(Pro) deacylase YbaK. | Putative membrane protein. | 0.412 |
AKJ03006.1 | AKJ00892.1 | AA314_04632 | AA314_02518 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | Putative membrane protein. | 0.415 |
AKJ03488.1 | AKI98466.1 | AA314_05114 | AA314_00093 | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | Hypothetical protein; Belongs to the UPF0337 (CsbD) family. | 0.582 |
AKJ03488.1 | AKJ00215.1 | AA314_05114 | AA314_01841 | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | Non-specific DNA-binding protein Dps; Belongs to the Dps family. | 0.600 |
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