Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00907.1General secretion pathway protein G. (143 aa)    
Predicted Functional Partners:
AKJ05717.1
General secretion pathway protein D.
 
  
 0.856
AKJ05719.1
General secretion pathway protein F.
 
  
 0.832
AKJ05718.1
General secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.812
AKJ05476.1
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
 
 
 0.769
AKJ00954.1
General secretion pathway protein F.
 
  
 0.742
AKJ08393.1
Type IV fimbrial assembly, ATPase PilB.
 
 
 0.741
AKJ04507.1
General secretion pathway protein E.
 
 
 0.726
AKJ06592.1
General secretion pathway protein C.
 
  
 0.717
AKJ06663.1
Type IV fimbrial assembly protein PilC.
 
  
 0.704
AKJ05716.1
General secretion pathway protein C.
 
  
 0.699
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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