STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00918.1Hypothetical protein. (315 aa)    
Predicted Functional Partners:
AKJ07626.1
Tryptophan synthase alpha chain.
  
     0.670
AKJ03257.1
Adventurous gliding motility protein K.
 
 
   0.668
AKJ02936.1
Putative periplasmic protein.
  
     0.666
AKJ05724.1
General secretion pathway protein I.
  
     0.649
AKJ06864.1
Threonine dehydrogenase.
  
     0.646
AKJ02410.1
TPR domain protein, putative component of TonB system.
  
 
   0.603
AKJ05323.1
Polyhydroxyalkanoic acid synthase.
  
     0.593
AKJ07642.1
Hypothetical protein.
 
     0.567
gluQ
glutamyl-Q-tRNA synthetase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.
       0.552
AKI98965.1
Tryptophan synthase alpha chain.
  
     0.550
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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