Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKJ00919.1Sensory box histidine kinase. (144 aa)    
Predicted Functional Partners:
AKJ00920.1
Sensory box histidine kinase.
 
 
 
 0.819
AKJ03001.1
Response regulator receiver protein.
  
   0.810
AKJ08451.1
DNA-binding response regulator KdpE.
  
   0.809
AKJ05090.1
Response regulator.
  
   0.805
AKJ08317.1
Response regulator.
  
   0.801
AKJ02691.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
   0.797
AKJ06433.1
DNA-binding response regulator.
  
   0.793
AKJ02464.1
Phosphate regulon transcriptional regulatory protein PhoB.
  
   0.792
AKJ04847.1
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP.
  
   0.790
AKJ03978.1
DNA-binding response regulator.
  
   0.786
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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