STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00929.1GGDEF domain protein. (351 aa)    
Predicted Functional Partners:
AKJ05823.1
Flagellar motor switch protein FliM.
  
 
 0.943
AKJ05845.1
EAL domain protein.
 
  
 0.879
AKJ07938.1
Hypothetical protein.
 
 
 0.831
AKJ03726.1
Hypothetical protein.
 
 
 0.821
AKJ04703.1
GGDEF domain protein.
 
  
 0.807
AKJ02656.1
Response regulator.
  
 0.798
AKJ08006.1
Signal transduction histidine kinase CheA.
  
 
 0.795
AKI99572.1
Putative SigmaB asociated two-component system sensor protein.
 
 
 0.785
AKJ04601.1
Response regulator.
  
 0.769
AKJ01950.1
FHA domain/GGDEF domain protein.
 
 
 0.762
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.