Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ00965.1 | AKJ00966.1 | AA314_02591 | AA314_02592 | Magnesium and cobalt efflux protein CorC. | Hypothetical protein. | 0.546 |
AKJ00965.1 | AKJ04734.1 | AA314_02591 | AA314_06360 | Magnesium and cobalt efflux protein CorC. | Putative ATPase. | 0.457 |
AKJ00965.1 | AKJ06860.1 | AA314_02591 | AA314_08486 | Magnesium and cobalt efflux protein CorC. | Hypothetical protein. | 0.401 |
AKJ00965.1 | AKJ07085.1 | AA314_02591 | AA314_08711 | Magnesium and cobalt efflux protein CorC. | Chemotaxis regulator. | 0.415 |
AKJ00965.1 | ybeY | AA314_02591 | AA314_04198 | Magnesium and cobalt efflux protein CorC. | Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.544 |
AKJ00966.1 | AKJ00965.1 | AA314_02592 | AA314_02591 | Hypothetical protein. | Magnesium and cobalt efflux protein CorC. | 0.546 |
AKJ04734.1 | AKJ00965.1 | AA314_06360 | AA314_02591 | Putative ATPase. | Magnesium and cobalt efflux protein CorC. | 0.457 |
AKJ06860.1 | AKJ00965.1 | AA314_08486 | AA314_02591 | Hypothetical protein. | Magnesium and cobalt efflux protein CorC. | 0.401 |
AKJ07085.1 | AKJ00965.1 | AA314_08711 | AA314_02591 | Chemotaxis regulator. | Magnesium and cobalt efflux protein CorC. | 0.415 |
ybeY | AKJ00965.1 | AA314_04198 | AA314_02591 | Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | Magnesium and cobalt efflux protein CorC. | 0.544 |