STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00974.1Glycogen debranching enzyme; Belongs to the glycosyl hydrolase 13 family. (710 aa)    
Predicted Functional Partners:
AKJ07474.1
4-alpha-glucanotransferase.
 
 0.995
AKJ01434.1
Malto-oligosyltrehalose synthase.
 
 0.989
glgB
1,4-alpha-glucan; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
0.988
AKJ06736.1
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
 0.965
AKJ03632.1
Trehalose synthase.
 
 
 0.954
AKI99840.1
4-alpha-glucanotransferase.
 
 
 0.941
AKJ07785.1
Trehalose synthase.
 
 0.941
AKJ00982.1
Cytoplasmic alpha-amylase.
 
 
 0.938
AKJ02217.1
Cytoplasmic alpha-amylase.
 
 
 0.931
AKI99151.1
Glycogen debranching enzyme; Belongs to the glycosyl hydrolase 13 family.
  
  
 
0.919
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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