STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ00975.1Regulator of cell morphogenesis and NO signaling. (159 aa)    
Predicted Functional Partners:
AKJ00973.1
Hypothetical protein.
 
     0.573
AKJ07428.1
Hypothetical protein.
  
     0.550
AKJ00976.1
Sensory box histidine kinase/response regulator.
       0.484
AKJ00974.1
Glycogen debranching enzyme; Belongs to the glycosyl hydrolase 13 family.
       0.476
AKJ06723.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
     0.453
AKJ00977.1
Sensor histidine kinase.
       0.417
AKJ02082.1
Chemotaxis protein methyltransferase CheR.
  
    0.400
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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