STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01018.1Peptidase, M19 family. (768 aa)    
Predicted Functional Partners:
AKI99115.1
Hypothetical protein.
  
   0.775
AKI99735.1
Inner spore coat protein H.
  
     0.767
AKJ06761.1
Molybdate metabolism regulator.
  
     0.766
AKI99350.1
Phosphoesterase protein.
  
     0.762
AKJ01278.1
Ferric siderophore transport system, periplasmic binding protein TonB.
  
     0.747
AKJ04075.1
Hypothetical protein.
  
     0.738
AKJ07549.1
Hypothetical protein.
  
     0.725
AKI99540.1
Lycopene cyclase, CruA type.
  
     0.719
AKI99840.1
4-alpha-glucanotransferase.
  
     0.713
AKJ02042.1
RTX toxin.
  
    0.703
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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