STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01032.1Putative DeoR-family transcriptional regulator. (339 aa)    
Predicted Functional Partners:
AKJ01033.1
Putative DNA-binding protein.
     0.971
AKJ01034.1
Adenylate cyclase.
 
     0.802
AKJ03942.1
Transcriptional regulator, DeoR family.
  
     0.757
AKJ07746.1
Transcriptional regulator, DeoR family.
  
     0.692
AKJ03411.1
Transcriptional regulator, DeoR family.
  
     0.683
AKJ07603.1
PTS system, mannose-specific IIC component.
  
     0.494
AKJ03638.1
Hypothetical protein.
  
    0.490
AKJ05033.1
AglU.
  
    0.481
AKJ02410.1
TPR domain protein, putative component of TonB system.
  
    0.459
AKJ05504.1
Hypothetical protein.
  
     0.459
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.