Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ01041.1Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (910 aa)    
Predicted Functional Partners:
AKI99644.1
Citrate synthase.
 
 0.997
AKJ05626.1
Citrate synthase.
 
 0.996
AKJ03414.1
Isocitrate dehydrogenase.
 
 0.995
AKJ03389.1
Citrate synthase; Belongs to the citrate synthase family.
 
 0.994
AKJ07293.1
Isocitrate dehydrogenase.
 
 0.984
fumC
Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 0.961
AKJ07451.1
Isocitrate lyase.
   
 
 0.932
AKJ07087.1
2-oxoglutarate dehydrogenase E1 component.
 
 0.890
AKJ03417.1
Succinate dehydrogenase iron-sulfur protein.
  
 
 0.873
atpA
ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
   
 0.864
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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