Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01093.1Hypothetical protein. (178 aa)    
Predicted Functional Partners:
AKJ01095.1
RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
    0.830
AKJ01092.1
Hypothetical protein.
       0.773
AKJ01094.1
Hypothetical protein.
       0.773
AKJ04892.1
Type IV fimbrial biogenesis protein PilY1.
  
     0.690
AKJ06280.1
Signal recognition particle receptor protein FtsY.
  
     0.679
AKJ07515.1
Microbial collagenase, secreted.
  
     0.665
AKJ07493.1
Cytochrome c family protein.
  
     0.657
AKJ01091.1
Serine/threonine protein kinase PrkC, regulator of stationary phase.
       0.625
AKJ00154.1
Hypothetical protein.
  
     0.601
AKJ07049.1
Hypothetical protein.
  
     0.595
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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