STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01114.1Putative ROK-family transcriptional regulator. (409 aa)    
Predicted Functional Partners:
AKJ01112.1
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA.
 
     0.812
AKJ01107.1
Hypothetical protein.
 
   
 0.811
AKJ01108.1
Beta-glucosidase.
  
  
 0.801
AKJ01110.1
Peptide ABC transporter, ATP-binding protein.
       0.778
AKJ01109.1
ABC transporter, ATP-binding component 2; Belongs to the ABC transporter superfamily.
       0.773
AKJ01111.1
ABC transporter, permease component 1.
       0.773
AKJ01113.1
Endo-1,4-beta-xylanase A precursor.
       0.773
AKJ01115.1
Hypothetical protein.
       0.773
AKJ01106.1
Putative lipoprotein.
       0.697
AKJ01105.1
Putative lipoprotein.
       0.649
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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