STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01116.1Thiol oxidoreductase. (740 aa)    
Predicted Functional Partners:
AKJ07134.1
Iron-regulated protein A precursor.
 
    0.915
AKJ07136.1
Iron-regulated protein A precursor.
 
  
 0.903
AKJ01850.1
Beta-glucosidase.
 
      0.899
AKJ01117.1
Cytochrome P450.
       0.545
AKJ04159.1
Sarcosine oxidase beta subunit.
  
    0.471
AKJ04223.1
Thiamin biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
   
    0.467
AKJ05036.1
Adventurous gliding motility protein S.
  
    0.463
AKJ05037.1
TolR-like protein.
  
    0.437
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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