Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ01120.1Transcriptional regulator, IclR family. (283 aa)    
Predicted Functional Partners:
AKJ02861.1
Allophanate hydrolase 2 subunit 1.
  
  
 0.842
AKJ02860.1
Allophanate hydrolase 2 subunit 2.
  
  
 0.807
AKJ01119.1
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.716
AKJ01121.1
Hypothetical protein.
     
 0.710
AKJ02862.1
Hypothetical protein; Belongs to the D-glutamate cyclase family.
  
  
 0.686
AKJ02858.1
Lactam utilization protein LamB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
  
 0.607
AKJ01122.1
Alg9 family protein mannosyltransferase.
       0.542
AKJ05403.1
Acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor.
  
     0.539
AKJ02857.1
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family.
  
  
 0.518
AKJ03741.1
Hydroxymethylglutaryl-CoA lyase.
 
   
 0.511
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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