STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01121.1Hypothetical protein. (319 aa)    
Predicted Functional Partners:
AKJ01120.1
Transcriptional regulator, IclR family.
     
 0.711
AKJ01122.1
Alg9 family protein mannosyltransferase.
       0.594
AKJ02424.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.535
AKJ02806.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.535
AKJ02809.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.535
AKJ01119.1
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.499
AKJ05086.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.469
AKJ03529.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.441
AKJ07976.1
Hypothetical protein.
    
  0.427
AKJ01428.1
Long-chain-fatty-acid CoA ligase.
  
 
 0.426
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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