STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01123.1Putative membrane protein. (382 aa)    
Predicted Functional Partners:
AKI99524.1
Negative regulator of beta-lactamase expression.
  
     0.611
AKJ02116.1
Negative regulator of beta-lactamase expression.
  
     0.611
AKJ03586.1
Putative secreted protein.
  
     0.609
AKJ04472.1
Putative secreted protein.
  
     0.602
AKJ04474.1
Negative regulator of beta-lactamase expression.
  
     0.584
AKJ06084.1
Acyltransferase family protein.
  
     0.537
vgb
Hypothetical protein; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid.
  
     0.508
AKJ01124.1
Acetylornithine deacetylase.
  
    0.496
AKJ04587.1
Putative esterase.
 
     0.484
AKJ05389.1
Chitinase.
  
     0.436
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.