STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01130.1Glycosyltransferase. (404 aa)    
Predicted Functional Partners:
AKJ05132.1
Capsular polysaccharide biosynthesis protein.
 
  
 0.648
AKJ00513.1
UDP-glucose 6-dehydrogenase.
 
  
 0.637
AKJ00499.1
Glycosyltransferase.
  
     0.633
AKJ05018.1
Glycosyl transferase, group 1.
  
     0.597
AKJ00493.1
Glycosyltransferase.
  
   
 0.546
AKJ01129.1
Hypothetical protein.
       0.542
AKJ04658.1
Capsular polysaccharide biosynthesis protein.
 
  
 0.524
AKJ00494.1
Glycosyltransferase.
  
     0.511
AKI99077.1
Glycosyltransferase.
  
     0.499
AKJ00488.1
Capsular exopolysaccharide family protein.
 
  
 0.498
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.