Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01143.1Hypothetical protein. (375 aa)    
Predicted Functional Partners:
AKJ01144.1
Chaperone protein HtpG.
 
   
 0.947
AKJ03979.1
Hypothetical protein.
  
 
  0.659
AKJ01657.1
Streptogrisin-C precursor.
  
     0.626
AKJ04056.1
Molybdate metabolism regulator.
  
     0.605
AKJ07382.1
Exonuclease SbcC.
 
 
 
 0.601
AKJ01243.1
Hypothetical protein.
  
     0.537
AKJ01142.1
Putative Bacterial Ig-like domain protein.
       0.535
AKJ05652.1
Zn-dependent protease.
  
 
  0.532
AKJ02600.1
Cell division protein FtsK.
 
 
 
 0.510
AKJ08455.1
Putative serine/threonine protein kinase.
  
     0.506
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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