Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ00404.1 | AKJ01139.1 | AA314_02030 | AA314_02765 | DNA-binding response regulator, AraC family. | Two-component sensor PilS. | 0.692 |
AKJ00404.1 | AKJ01161.1 | AA314_02030 | AA314_02787 | DNA-binding response regulator, AraC family. | Sensor histidine kinase. | 0.805 |
AKJ01139.1 | AKJ00404.1 | AA314_02765 | AA314_02030 | Two-component sensor PilS. | DNA-binding response regulator, AraC family. | 0.692 |
AKJ01139.1 | AKJ01161.1 | AA314_02765 | AA314_02787 | Two-component sensor PilS. | Sensor histidine kinase. | 0.780 |
AKJ01139.1 | AKJ01623.1 | AA314_02765 | AA314_03249 | Two-component sensor PilS. | Two-component response regulator. | 0.591 |
AKJ01139.1 | AKJ01938.1 | AA314_02765 | AA314_03564 | Two-component sensor PilS. | Phosphate regulon transcriptional regulatory protein PhoB. | 0.524 |
AKJ01139.1 | AKJ02562.1 | AA314_02765 | AA314_04188 | Two-component sensor PilS. | Chemotaxis regulator. | 0.570 |
AKJ01139.1 | AKJ02691.1 | AA314_02765 | AA314_04317 | Two-component sensor PilS. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.655 |
AKJ01139.1 | AKJ04847.1 | AA314_02765 | AA314_06473 | Two-component sensor PilS. | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | 0.524 |
AKJ01139.1 | AKJ06292.1 | AA314_02765 | AA314_07918 | Two-component sensor PilS. | Phosphate regulon transcriptional regulatory protein PhoB. | 0.560 |
AKJ01139.1 | AKJ07309.1 | AA314_02765 | AA314_08935 | Two-component sensor PilS. | Phosphate regulon transcriptional regulatory protein PhoB. | 0.528 |
AKJ01139.1 | AKJ08451.1 | AA314_02765 | AA314_10077 | Two-component sensor PilS. | DNA-binding response regulator KdpE. | 0.692 |
AKJ01161.1 | AKJ00404.1 | AA314_02787 | AA314_02030 | Sensor histidine kinase. | DNA-binding response regulator, AraC family. | 0.805 |
AKJ01161.1 | AKJ01139.1 | AA314_02787 | AA314_02765 | Sensor histidine kinase. | Two-component sensor PilS. | 0.780 |
AKJ01161.1 | AKJ01623.1 | AA314_02787 | AA314_03249 | Sensor histidine kinase. | Two-component response regulator. | 0.807 |
AKJ01161.1 | AKJ01938.1 | AA314_02787 | AA314_03564 | Sensor histidine kinase. | Phosphate regulon transcriptional regulatory protein PhoB. | 0.807 |
AKJ01161.1 | AKJ02562.1 | AA314_02787 | AA314_04188 | Sensor histidine kinase. | Chemotaxis regulator. | 0.814 |
AKJ01161.1 | AKJ02691.1 | AA314_02787 | AA314_04317 | Sensor histidine kinase. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.826 |
AKJ01161.1 | AKJ04847.1 | AA314_02787 | AA314_06473 | Sensor histidine kinase. | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | 0.802 |
AKJ01161.1 | AKJ06292.1 | AA314_02787 | AA314_07918 | Sensor histidine kinase. | Phosphate regulon transcriptional regulatory protein PhoB. | 0.804 |
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