STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01178.1Hypothetical protein. (690 aa)    
Predicted Functional Partners:
AKJ01179.1
Hypothetical protein.
      0.972
AKJ01180.1
Ribosomal-protein-L7p-serine acetyltransferase.
       0.650
AKJ06825.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
  
 
 0.588
AKJ06911.1
Superoxide dismutase.
  
 
 0.588
AKJ03417.1
Succinate dehydrogenase iron-sulfur protein.
   
 
 0.542
AKJ01485.1
Alkyl hydroperoxide reductase protein C.
   
 
 0.454
AKJ01181.1
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
   
   0.453
AKI99990.1
Organic hydroperoxide resistance protein.
  
  
 0.430
AKJ07183.1
Organic hydroperoxide resistance protein.
  
  
 0.430
AKI99035.1
Hypothetical protein.
  
 
 0.416
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.