Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI99839.1 | AKJ00124.1 | AA314_01466 | AA314_01750 | Phytochrome, two-component sensor histidine kinase. | Phytochrome, two-component sensor histidine kinase. | 0.419 |
AKI99839.1 | AKJ01193.1 | AA314_01466 | AA314_02819 | Phytochrome, two-component sensor histidine kinase. | DNA repair protein RadA. | 0.443 |
AKI99839.1 | AKJ04546.1 | AA314_01466 | AA314_06172 | Phytochrome, two-component sensor histidine kinase. | Phytochrome, two-component sensor histidine kinase. | 0.716 |
AKJ00042.1 | AKJ01193.1 | AA314_01668 | AA314_02819 | Two-component hybrid sensor and regulator. | DNA repair protein RadA. | 0.402 |
AKJ00042.1 | AKJ04546.1 | AA314_01668 | AA314_06172 | Two-component hybrid sensor and regulator. | Phytochrome, two-component sensor histidine kinase. | 0.511 |
AKJ00124.1 | AKI99839.1 | AA314_01750 | AA314_01466 | Phytochrome, two-component sensor histidine kinase. | Phytochrome, two-component sensor histidine kinase. | 0.419 |
AKJ00124.1 | AKJ01193.1 | AA314_01750 | AA314_02819 | Phytochrome, two-component sensor histidine kinase. | DNA repair protein RadA. | 0.443 |
AKJ00124.1 | AKJ04546.1 | AA314_01750 | AA314_06172 | Phytochrome, two-component sensor histidine kinase. | Phytochrome, two-component sensor histidine kinase. | 0.718 |
AKJ01191.1 | AKJ01192.1 | AA314_02817 | AA314_02818 | Glutaryl-CoA dehydrogenase. | Hypothetical protein. | 0.496 |
AKJ01191.1 | AKJ01193.1 | AA314_02817 | AA314_02819 | Glutaryl-CoA dehydrogenase. | DNA repair protein RadA. | 0.496 |
AKJ01191.1 | AKJ01194.1 | AA314_02817 | AA314_02820 | Glutaryl-CoA dehydrogenase. | Phytochrome, two-component sensor histidine kinase. | 0.421 |
AKJ01192.1 | AKJ01191.1 | AA314_02818 | AA314_02817 | Hypothetical protein. | Glutaryl-CoA dehydrogenase. | 0.496 |
AKJ01192.1 | AKJ01193.1 | AA314_02818 | AA314_02819 | Hypothetical protein. | DNA repair protein RadA. | 0.773 |
AKJ01192.1 | AKJ01194.1 | AA314_02818 | AA314_02820 | Hypothetical protein. | Phytochrome, two-component sensor histidine kinase. | 0.642 |
AKJ01192.1 | AKJ01195.1 | AA314_02818 | AA314_02821 | Hypothetical protein. | Hypothetical protein. | 0.449 |
AKJ01193.1 | AKI99839.1 | AA314_02819 | AA314_01466 | DNA repair protein RadA. | Phytochrome, two-component sensor histidine kinase. | 0.443 |
AKJ01193.1 | AKJ00042.1 | AA314_02819 | AA314_01668 | DNA repair protein RadA. | Two-component hybrid sensor and regulator. | 0.402 |
AKJ01193.1 | AKJ00124.1 | AA314_02819 | AA314_01750 | DNA repair protein RadA. | Phytochrome, two-component sensor histidine kinase. | 0.443 |
AKJ01193.1 | AKJ01191.1 | AA314_02819 | AA314_02817 | DNA repair protein RadA. | Glutaryl-CoA dehydrogenase. | 0.496 |
AKJ01193.1 | AKJ01192.1 | AA314_02819 | AA314_02818 | DNA repair protein RadA. | Hypothetical protein. | 0.773 |
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