STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01235.1Outer membrane protein A precursor. (562 aa)    
Predicted Functional Partners:
AKJ06767.1
Flagellar motor rotation protein MotB.
  
 
 0.741
AKJ04614.1
Outer membrane protein A precursor.
  
     0.733
AKJ07964.1
Ferric siderophore transport system, biopolymer transport protein ExbB.
 
   
 0.550
AKJ01236.1
Hypothetical protein.
       0.521
AKJ03669.1
Hypothetical protein.
 
 
 0.478
AKJ08187.1
Flagellar motor rotation protein MotB.
  
 
 0.478
AKJ05038.1
Ferric siderophore transport system, biopolymer transport protein ExbB.
 
   
 0.455
AKJ07517.1
MotA/TolQ/ExbB proton channel family protein.
 
   
 0.455
AKJ06332.1
TonB family protein.
 
 
 
 0.451
AKJ01237.1
Hypothetical protein.
       0.446
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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