STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01239.1Two-component oxygen-sensor histidine kinase FixL. (636 aa)    
Predicted Functional Partners:
AKJ03910.1
Two-component response regulator.
 
 0.831
AKJ01161.1
Sensor histidine kinase.
 
 
   0.764
AKJ07726.1
Serine phosphatase RsbU, regulator of sigma subunit.
    0.750
AKI99740.1
Hypothetical protein.
  
 
   0.747
AKJ00612.1
Diguanylate cyclase/phosphodiesterase.
 
 
 0.745
AKJ06280.1
Signal recognition particle receptor protein FtsY.
  
 
   0.742
AKJ07441.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.741
AKJ00154.1
Hypothetical protein.
  
    0.735
AKJ06722.1
Sensory box histidine kinase/response regulator.
 
 
0.725
AKJ04547.1
Diguanylate cyclase/phosphodiesterase.
   0.722
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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