| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| def-3 | fmt | AA314_02883 | AA314_02777 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.967 |
| def-3 | rplI | AA314_02883 | AA314_03768 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | LSU ribosomal protein L9p; Binds to the 23S rRNA. | 0.750 |
| def-3 | rplS | AA314_02883 | AA314_05052 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | LSU ribosomal protein L19p; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.746 |
| def-3 | rplT | AA314_02883 | AA314_05148 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.806 |
| def-3 | rplU | AA314_02883 | AA314_02928 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.783 |
| def-3 | rpsF | AA314_02883 | AA314_03770 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA. | 0.749 |
| def-3 | rpsP | AA314_02883 | AA314_05048 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family. | 0.766 |
| def-3 | rpsT | AA314_02883 | AA314_04192 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | SSU ribosomal protein S20p; Binds directly to 16S ribosomal RNA. | 0.752 |
| def-3 | rpsU | AA314_02883 | AA314_03574 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | SSU ribosomal protein S21p; Belongs to the bacterial ribosomal protein bS21 family. | 0.747 |
| def-3 | tig | AA314_02883 | AA314_03360 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Cell division trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.748 |
| fmt | def-3 | AA314_02777 | AA314_02883 | Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.967 |
| fmt | rplU | AA314_02777 | AA314_02928 | Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.681 |
| rplI | def-3 | AA314_03768 | AA314_02883 | LSU ribosomal protein L9p; Binds to the 23S rRNA. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.750 |
| rplI | rplS | AA314_03768 | AA314_05052 | LSU ribosomal protein L9p; Binds to the 23S rRNA. | LSU ribosomal protein L19p; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.994 |
| rplI | rplT | AA314_03768 | AA314_05148 | LSU ribosomal protein L9p; Binds to the 23S rRNA. | LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.995 |
| rplI | rplU | AA314_03768 | AA314_02928 | LSU ribosomal protein L9p; Binds to the 23S rRNA. | LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.994 |
| rplI | rpsF | AA314_03768 | AA314_03770 | LSU ribosomal protein L9p; Binds to the 23S rRNA. | SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA. | 0.997 |
| rplI | rpsP | AA314_03768 | AA314_05048 | LSU ribosomal protein L9p; Binds to the 23S rRNA. | SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family. | 0.992 |
| rplI | rpsT | AA314_03768 | AA314_04192 | LSU ribosomal protein L9p; Binds to the 23S rRNA. | SSU ribosomal protein S20p; Binds directly to 16S ribosomal RNA. | 0.975 |
| rplI | rpsU | AA314_03768 | AA314_03574 | LSU ribosomal protein L9p; Binds to the 23S rRNA. | SSU ribosomal protein S21p; Belongs to the bacterial ribosomal protein bS21 family. | 0.978 |
STRING v12.5 is now available!
