Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI98790.1 | AKI98791.1 | AA314_00417 | AA314_00418 | Chromosome; Belongs to the ParB family. | Chromosome. | 0.996 |
AKI98790.1 | AKI99965.1 | AA314_00417 | AA314_01592 | Chromosome; Belongs to the ParB family. | Chromosome. | 0.922 |
AKI98790.1 | AKJ01289.1 | AA314_00417 | AA314_02915 | Chromosome; Belongs to the ParB family. | Cell division protein FtsK. | 0.808 |
AKI98790.1 | AKJ06699.1 | AA314_00417 | AA314_08325 | Chromosome; Belongs to the ParB family. | Chromosome. | 0.924 |
AKI98790.1 | xerC | AA314_00417 | AA314_06658 | Chromosome; Belongs to the ParB family. | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.474 |
AKI98790.1 | xerD | AA314_00417 | AA314_05650 | Chromosome; Belongs to the ParB family. | Site-specific recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.455 |
AKI98791.1 | AKI98790.1 | AA314_00418 | AA314_00417 | Chromosome. | Chromosome; Belongs to the ParB family. | 0.996 |
AKI98791.1 | AKJ01289.1 | AA314_00418 | AA314_02915 | Chromosome. | Cell division protein FtsK. | 0.729 |
AKI98791.1 | xerC | AA314_00418 | AA314_06658 | Chromosome. | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.461 |
AKI98791.1 | xerD | AA314_00418 | AA314_05650 | Chromosome. | Site-specific recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.449 |
AKI99965.1 | AKI98790.1 | AA314_01592 | AA314_00417 | Chromosome. | Chromosome; Belongs to the ParB family. | 0.922 |
AKI99965.1 | AKJ01289.1 | AA314_01592 | AA314_02915 | Chromosome. | Cell division protein FtsK. | 0.735 |
AKI99965.1 | xerC | AA314_01592 | AA314_06658 | Chromosome. | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.458 |
AKI99965.1 | xerD | AA314_01592 | AA314_05650 | Chromosome. | Site-specific recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.405 |
AKJ01289.1 | AKI98790.1 | AA314_02915 | AA314_00417 | Cell division protein FtsK. | Chromosome; Belongs to the ParB family. | 0.808 |
AKJ01289.1 | AKI98791.1 | AA314_02915 | AA314_00418 | Cell division protein FtsK. | Chromosome. | 0.729 |
AKJ01289.1 | AKI99965.1 | AA314_02915 | AA314_01592 | Cell division protein FtsK. | Chromosome. | 0.735 |
AKJ01289.1 | AKJ05518.1 | AA314_02915 | AA314_07144 | Cell division protein FtsK. | DNA internalization-related competence protein ComEC/Rec2. | 0.666 |
AKJ01289.1 | AKJ06699.1 | AA314_02915 | AA314_08325 | Cell division protein FtsK. | Chromosome. | 0.741 |
AKJ01289.1 | ftsQ | AA314_02915 | AA314_08004 | Cell division protein FtsK. | Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.742 |
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