STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ01310.1Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (303 aa)    
Predicted Functional Partners:
AKJ05190.1
Cyn operon transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.659
AKJ02864.1
Cyn operon transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.645
AKI99656.1
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.608
AKJ02502.1
Arabinose efflux permease.
 
     0.561
AKJ01311.1
Dehydrogenase with different specificities; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.540
AKJ08264.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.414
AKJ04629.1
Transcriptional regulator.
  
  
 0.413
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.